Package: babelgene 22.9

babelgene: Gene Orthologs for Model Organisms in a Tidy Data Format

Genomic analysis of model organisms frequently requires the use of databases based on human data or making comparisons to patient-derived resources. This requires harmonization of gene names into the same gene space. The 'babelgene' R package converts between human and non-human gene orthologs/homologs. The package integrates orthology assertion predictions sourced from multiple databases as compiled by the HGNC Comparison of Orthology Predictions (HCOP) (Wright et al. 2005 <doi:10.1007/s00335-005-0103-2>, Eyre et al. 2007 <doi:10.1093/bib/bbl030>, Seal et al. 2011 <doi:10.1093/nar/gkq892>).

Authors:Igor Dolgalev [aut, cre]

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Bug tracker:https://github.com/igordot/babelgene/issues

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2 exports 11 stars 4.03 score 16 dependencies 26 dependents 26 scripts 6.5k downloads

Last updated 2 years agofrom:ab61c529e3. Checks:OK: 7. Indexed: yes.

Exports:orthologsspecies

Dependencies:clidplyrfansigenericsgluelifecyclemagrittrpillarpkgconfigR6rlangtibbletidyselectutf8vctrswithr