{
  "_id": "6a55d743ff0138dec5d69946",
  "Type": "Package",
  "Package": "babelgene",
  "Title": "Gene Orthologs for Model Organisms in a Tidy Data Format",
  "Version": "22.9",
  "Authors@R": "person(\"Igor\", \"Dolgalev\", , \"igor.dolgalev@nyumc.org\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0003-4451-126X\"))",
  "Description": "Genomic analysis of model organisms frequently requires\nthe use of databases based on human data or making comparisons\nto patient-derived resources. This requires harmonization of\ngene names into the same gene space. The 'babelgene' R package\nconverts between human and non-human gene orthologs/homologs.\nThe package integrates orthology assertion predictions sourced\nfrom multiple databases as compiled by the HGNC Comparison of\nOrthology Predictions (HCOP) (Wright et al. 2005\n<doi:10.1007/s00335-005-0103-2>, Eyre et al. 2007\n<doi:10.1093/bib/bbl030>, Seal et al. 2011\n<doi:10.1093/nar/gkq892>).",
  "License": "MIT + file LICENSE",
  "URL": "https://igordot.github.io/babelgene/",
  "BugReports": "https://github.com/igordot/babelgene/issues",
  "VignetteBuilder": "knitr",
  "Config/testthat/edition": "3",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.2.1",
  "Repository": "https://igordot.r-universe.dev",
  "Date/Publication": "2022-09-28 17:52:11 UTC",
  "RemoteUrl": "https://github.com/igordot/babelgene",
  "RemoteRef": "v22.9",
  "RemoteSha": "ab61c529e31ce0bc1d0c17ef9c18bfa1bed41eb6",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-07-14 06:24:10 UTC",
    "User": "root"
  },
  "Author": "Igor Dolgalev [aut, cre] (ORCID:\n<https://orcid.org/0000-0003-4451-126X>)",
  "Maintainer": "Igor Dolgalev <igor.dolgalev@nyumc.org>",
  "_user": "igordot",
  "_type": "src",
  "_file": "babelgene_22.9.tar.gz",
  "_fileid": "https://r2.ropensci.org/a3b8882c807558f85a29ae26bc4bfd61b7279e72d0a966db304d35fc46b455ee",
  "_filesize": 3734660,
  "_sha256": "a3b8882c807558f85a29ae26bc4bfd61b7279e72d0a966db304d35fc46b455ee",
  "_expires": "2026-10-22T06:29:21.000Z",
  "_created": "2026-07-14T06:24:10.000Z",
  "_published": "2026-07-14T06:29:23.729Z",
  "_jobs": [
    {
      "job": 87015348634,
      "time": 224,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8302214197"
    },
    {
      "job": 87015348685,
      "time": 135,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8302187835"
    },
    {
      "job": 87015348645,
      "time": 102,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8302199926"
    },
    {
      "job": 87015348672,
      "time": 123,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8302221852"
    },
    {
      "job": 87014775144,
      "time": 228,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8302145551"
    },
    {
      "job": 87015348633,
      "time": 129,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8302186033"
    },
    {
      "job": 87015348659,
      "time": 117,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8302182706"
    },
    {
      "job": 87015348648,
      "time": 96,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8302176631"
    },
    {
      "job": 87015348668,
      "time": 113,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8302181545"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/igordot/actions/runs/29311066539",
  "_status": "success",
  "_upstream": "https://github.com/igordot/babelgene",
  "_commit": {
    "id": "ab61c529e31ce0bc1d0c17ef9c18bfa1bed41eb6",
    "author": "igor <6363505+igordot@users.noreply.github.com>",
    "committer": "igor <6363505+igordot@users.noreply.github.com>",
    "message": "Prepare for CRAN release\n",
    "time": 1664387531
  },
  "_maintainer": {
    "name": "Igor Dolgalev",
    "email": "igor.dolgalev@nyumc.org",
    "login": "igordot",
    "description": "",
    "uuid": 6363505,
    "orcid": "0000-0003-4451-126X"
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.4",
      "role": "Depends"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "rlang",
      "role": "Imports"
    },
    {
      "package": "covr",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "igordot",
  "_selfowned": true,
  "_usedby": 29,
  "_updates": [],
  "_tags": [],
  "_stars": 16,
  "_contributors": [
    {
      "user": "igordot",
      "count": 31,
      "uuid": 6363505
    }
  ],
  "_userbio": {
    "uuid": 6363505,
    "type": "user",
    "name": "igor",
    "followers": 133
  },
  "_downloads": {
    "count": 18450,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/babelgene"
  },
  "_devurl": "https://github.com/igordot/babelgene",
  "_pkgdown": "https://igordot.github.io/babelgene/",
  "_searchresults": 89,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/babelgene.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "LICENSE",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/igordot/babelgene",
  "_realowner": "igordot",
  "_cranurl": true,
  "_releases": [
    {
      "version": "21.4",
      "date": "2021-04-26"
    },
    {
      "version": "22.3",
      "date": "2022-03-30"
    },
    {
      "version": "22.9",
      "date": "2022-09-29"
    }
  ],
  "_exports": [
    "orthologs",
    "species"
  ],
  "_help": [
    {
      "page": "orthologs",
      "title": "Retrieve gene orthologs/homologs",
      "topics": [
        "orthologs"
      ]
    },
    {
      "page": "species",
      "title": "Retrieve the available species",
      "topics": [
        "species"
      ]
    }
  ],
  "_readme": "https://github.com/igordot/babelgene/raw/v22.9/README.md",
  "_rundeps": [
    "cli",
    "dplyr",
    "generics",
    "glue",
    "lifecycle",
    "magrittr",
    "pillar",
    "pkgconfig",
    "R6",
    "rlang",
    "tibble",
    "tidyselect",
    "utf8",
    "vctrs",
    "withr"
  ],
  "_vignettes": [
    {
      "source": "babelgene-intro.Rmd",
      "filename": "babelgene-intro.html",
      "title": "Introduction to babelgene",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Overview",
        "Usage",
        "Details"
      ],
      "created": "2021-04-23 23:58:42",
      "modified": "2022-09-23 19:56:17",
      "commits": 6
    }
  ],
  "_score": 9.057995616750555,
  "_indexed": true,
  "_nocasepkg": "babelgene",
  "_universes": [
    "igordot"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "22.9",
      "date": "2026-07-14T06:27:53.000Z",
      "distro": "resolute",
      "commit": "ab61c529e31ce0bc1d0c17ef9c18bfa1bed41eb6",
      "fileid": "https://r2.ropensci.org/692eee4a0fb1284ff6a18bebfe6d672e46767448f799bee1297119abab2ace6d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/igordot/actions/runs/29311066539"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "22.9",
      "date": "2026-07-14T06:26:30.000Z",
      "distro": "resolute",
      "commit": "ab61c529e31ce0bc1d0c17ef9c18bfa1bed41eb6",
      "fileid": "https://r2.ropensci.org/ff10d541eb3427e50c938d458703dae4cf1711f862e9bc760de225db218fdfff",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/igordot/actions/runs/29311066539"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "22.9",
      "date": "2026-07-14T06:27:10.000Z",
      "commit": "ab61c529e31ce0bc1d0c17ef9c18bfa1bed41eb6",
      "fileid": "https://r2.ropensci.org/7d01f66c93b47b2e40e2f7c7b30539e817bebd18e073e521ec2bad0ca8a00e62",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/igordot/actions/runs/29311066539"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "22.9",
      "date": "2026-07-14T06:28:15.000Z",
      "commit": "ab61c529e31ce0bc1d0c17ef9c18bfa1bed41eb6",
      "fileid": "https://r2.ropensci.org/ebef8e92c05a65211add5984f00b8c7d6251ce7bd75b0af82d3ca38f31147e47",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/igordot/actions/runs/29311066539"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "22.9",
      "date": "2026-07-14T06:26:40.000Z",
      "commit": "ab61c529e31ce0bc1d0c17ef9c18bfa1bed41eb6",
      "fileid": "https://r2.ropensci.org/89d6e8cc3749f76a56b4692269bab8280198f6453fb234a9b687c1bc1d667be8",
      "status": "success",
      "buildurl": "https://github.com/r-universe/igordot/actions/runs/29311066539"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "22.9",
      "date": "2026-07-14T06:25:56.000Z",
      "commit": "ab61c529e31ce0bc1d0c17ef9c18bfa1bed41eb6",
      "fileid": "https://r2.ropensci.org/9a1ebc871686c61dc9d57bf8a0110ce313ee06feda0793665e6f4de70e33267d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/igordot/actions/runs/29311066539"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "22.9",
      "date": "2026-07-14T06:25:39.000Z",
      "commit": "ab61c529e31ce0bc1d0c17ef9c18bfa1bed41eb6",
      "fileid": "https://r2.ropensci.org/56d092b18ffad75b29a5a0b47eb21a2d0cea9a7397ce27c74ca93a2cce34d001",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/igordot/actions/runs/29311066539"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "22.9",
      "date": "2026-07-14T06:25:55.000Z",
      "commit": "ab61c529e31ce0bc1d0c17ef9c18bfa1bed41eb6",
      "fileid": "https://r2.ropensci.org/5cbd6be09d4a333d36e4f50b85504558eadc2916cb3d84703cd82cb9c822142f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/igordot/actions/runs/29311066539"
    }
  ]
}