Package: scooter
Title: Streamlined scRNA-Seq Analysis Pipeline
Version: 0.0.0.9004
Authors@R: c(
    person("Igor", "Dolgalev", email = "igor.dolgalev@nyumc.org", role = c("cre", "aut")), 
    person("Anna", "Yeaton", email = "ahyeaton@gmail.com", role = "aut"))
Description: Streamlined scRNA-Seq analysis pipeline.
License: MIT + file LICENCE
Encoding: UTF-8
biocViews:
Depends: R (>= 4.1)
Imports: cowplot, data.table, dplyr, ggplot2, ggsci, glue, irlba,
        magrittr, Matrix, matrixStats, methods, purrr, RColorBrewer,
        readr, rlang (>= 1.0.0), Rtsne, sctransform, Seurat (>= 4.0.2),
        SeuratObject, stringr, tibble, tidyr, uwot
Suggests: roxygen2, testthat
RoxygenNote: 7.2.1
Config/pak/sysreqs: cmake libglpk-dev make libicu-dev libpng-dev
        libuv1-dev libxml2-dev libssl-dev python3 libx11-dev zlib1g-dev
Repository: https://igordot.r-universe.dev
Date/Publication: 2023-11-17 22:09:58 UTC
RemoteUrl: https://github.com/igordot/scooter
RemoteRef: HEAD
RemoteSha: 2a639459d3848e111717624497797441cfbf1747
NeedsCompilation: no
Packaged: 2026-06-19 07:57:48 UTC; root
Author: Igor Dolgalev [cre, aut],
  Anna Yeaton [aut]
Maintainer: Igor Dolgalev <igor.dolgalev@nyumc.org>