Package: scooter
Title: Streamlined scRNA-Seq Analysis Pipeline
Version: 0.0.0.9005
Authors@R: c(
    person("Igor", "Dolgalev", , "igor.dolgalev@nyumc.org", role = c("cre", "aut")),
    person("Anna", "Yeaton", , "ahyeaton@gmail.com", role = "aut")
  )
Description: Streamlined scRNA-Seq analysis pipeline.
License: MIT + file LICENSE
Depends: R (>= 4.4), Seurat (>= 5.3.1)
Imports: cowplot, data.table, dplyr, eulerr, future, ggplot2, ggsci,
        glue, irlba, lifecycle, Matrix, matrixStats, methods, pheatmap,
        purrr, qs2, RColorBrewer, readr, rlang (>= 1.0.0), Rtsne,
        scales, SeuratObject (>= 5.0.0), stringr, tibble, tidyr,
        UpSetR, uwot (>= 0.2.1)
Suggests: roxygen2, testthat
biocViews:
Config/roxygen2/version: 8.1.0
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
Config/pak/sysreqs: cmake libglpk-dev make libicu-dev libpng-dev
        libuv1-dev libxml2-dev libssl-dev python3 libx11-dev zlib1g-dev
        libclang-dev
Repository: https://igordot.r-universe.dev
Date/Publication: 2026-10-07 20:56:57 UTC
RemoteUrl: https://github.com/igordot/scooter
RemoteRef: HEAD
RemoteSha: 5514bdff4ca9a74e6a4da4d7561015118657632c
NeedsCompilation: no
Packaged: 2026-10-07 22:16:53 UTC; root
Author: Igor Dolgalev [cre, aut],
  Anna Yeaton [aut]
Maintainer: Igor Dolgalev <igor.dolgalev@nyumc.org>